spacer
spacer

PDBsum entry 3r54

Go to PDB code: 
Top Page protein ligands links
Tunnel analysis for: 3r54 calculated with MOLE 2.0 PDB id
3r54
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
2 tunnels, coloured by tunnel radius 2 tunnels, coloured by tunnel radius 2 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 2.15 12.1 -1.55 -0.67 14.0 93 1 0 1 1 0 0 0  
2 1.30 3.7 -3.09 -0.69 38.3 86 2 1 1 0 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
spacer
spacer