PDBsum entry 3r3c

Tunnel analysis for: 3r3c calculated with

MOLE 2.0

PDB id

3r3c

Tunnels calculated on whole structure

Tunnels calculated excluding ligands

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MOLEonline 2.0 manipulation
and
visualization
with HETATM:

without HETATM:

0 tunnels, coloured by tunnel radius

6 tunnels, coloured by tunnel radius

6 tunnels, coloured as in
list below

Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.

Tunnels

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.23

2.37

24.6

-0.89

-0.39

14.3

82

1

3

1

6

0

1

0

4CO 152 A

2

1.24

2.36

25.0

-0.88

-0.43

13.0

82

2

2

1

5

1

1

0

4CO 152 A

3

1.19

2.35

30.3

-1.44

-0.17

17.6

82

3

4

1

7

1

0

0

4CO 152 A

4

1.49

1.56

27.1

-1.03

-0.35

13.8

80

3

3

1

4

2

1

0

4CO 152 B

5

1.48

1.55

27.4

-1.17

-0.01

15.3

76

2

2

1

5

2

1

0

4CO 152 B

6

1.49

1.56

28.4

-1.09

-0.30

15.6

79

3

3

1

5

1

1

0

4CO 152 B

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Tunnels were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.