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PDBsum entry 3qyk

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Tunnel analysis for: 3qyk calculated with MOLE 2.0 PDB id
3qyk
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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6 tunnels, coloured by tunnel radius 10 tunnels, coloured by tunnel radius 10 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 2.07 13.8 -0.08 0.11 8.2 80 2 0 2 3 2 2 0  263 IE2 A
2 2.07 15.1 -0.35 0.06 8.2 78 2 0 2 3 2 1 0  263 IE2 A
3 1.32 11.6 -1.71 -0.63 12.0 75 3 0 2 0 0 1 0  
4 1.32 17.3 -1.92 -0.69 11.7 73 3 1 2 0 0 2 0  
5 1.32 18.2 -2.01 -0.57 18.9 80 4 1 2 1 0 1 0  
6 1.99 5.5 -0.98 0.03 31.4 67 2 1 0 2 0 0 0  
7 1.73 12.4 -2.57 -0.31 41.6 72 2 2 0 1 0 0 0  
8 1.50 4.4 -1.85 -0.30 16.5 65 1 0 0 1 1 1 0  
9 1.39 9.5 -1.72 0.48 19.7 64 2 1 1 0 3 1 0  
10 1.47 10.3 -1.53 -0.67 17.3 70 2 0 0 0 0 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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