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PDBsum entry 3qyk

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Cleft analysis for: 3qyk PDB id
3qyk
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 2997.00 3.02 65.33 4 11.55 1 15.00 1 9 8 11 13 8 9 0 DMS 3092[A], IE2 263[A] (28 atoms)
2 991.83 0.00 55.89 10 6.65 7 8.42 4 4 2 2 5 1 4 0  
3 561.52 0.00 56.87 9 6.45 8 8.53 3 4 0 2 2 3 0 0  
4 574.17 0.00 61.72 6 6.68 6 7.74 5 2 3 3 4 1 2 0  
5 543.80 0.00 57.51 7 6.34 9 7.19 7 2 2 2 3 0 5 0  
6 412.17 0.00 75.27 1 8.99 2 8.59 2 4 1 2 2 1 4 0  
7 450.56 0.00 68.10 2 6.95 5 6.38 8 3 3 2 3 2 3 0  
8 325.69 0.00 64.47 5 7.63 3 7.24 6 1 2 5 1 2 0 0  
9 344.25 0.00 57.48 8 3.31 10 6.23 9 2 4 4 1 0 1 0  
10 318.09 0.00 67.88 3 7.12 4 5.97 10 1 2 2 3 2 2 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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