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PDBsum entry 3qqk
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Tunnel analysis for: 3qqk calculated with  MOLE 2.0
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PDB id
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3qqk
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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1 tunnel,
coloured by tunnel radius |
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7 tunnels,
coloured by
tunnel radius
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7 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.58 |
1.76 |
17.1 |
0.89 |
0.00 |
6.4 |
84 |
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0 |
2 |
1 |
5 |
1 |
0 |
0 |
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X02 497 A
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2 |
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1.22 |
1.42 |
21.7 |
0.04 |
-0.15 |
7.8 |
71 |
1 |
0 |
1 |
5 |
2 |
0 |
0 |
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3 |
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1.56 |
1.67 |
27.9 |
0.91 |
0.22 |
11.6 |
81 |
3 |
2 |
0 |
6 |
2 |
0 |
0 |
X02 497 A
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4 |
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1.25 |
2.21 |
27.9 |
1.25 |
0.31 |
9.7 |
71 |
2 |
1 |
0 |
7 |
2 |
0 |
0 |
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5 |
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1.51 |
1.86 |
30.2 |
2.89 |
0.99 |
1.5 |
74 |
2 |
0 |
0 |
10 |
4 |
0 |
0 |
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6 |
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1.37 |
1.52 |
32.2 |
2.17 |
0.70 |
2.9 |
76 |
2 |
0 |
1 |
10 |
4 |
1 |
0 |
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7 |
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1.17 |
3.36 |
15.7 |
0.19 |
0.65 |
3.1 |
66 |
1 |
1 |
0 |
3 |
5 |
2 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program