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PDBsum entry 3qqc

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Top Page protein metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 3qqc calculated with MOLE 2.0 PDB id
3qqc
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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6 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.47 1.72 15.2 -0.67 -0.19 12.4 76 2 1 0 3 1 1 0  
2 1.44 1.53 19.7 -1.31 -0.29 23.6 71 4 2 0 3 0 1 1  
3 1.11 2.39 24.0 -0.02 -0.02 12.9 74 3 2 0 7 2 1 0  
4 1.45 1.81 25.3 -0.97 -0.26 14.4 74 3 3 0 3 2 2 0  
5 1.21 1.62 19.1 1.59 0.62 10.4 76 1 2 0 4 2 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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