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PDBsum entry 3qny

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Top Page protein ligands Protein-protein interface(s) links
Immune system PDB id
3qny
Contents
Protein chains
218 a.a.
213 a.a.
Ligands
GOL ×2
Waters ×245

References listed in PDB file
Key reference
Title Structure of a human iga1 FAB fragment at 1.55 å resolution: potential effect of the constant domains on antigen-Affinity modulation.
Authors A.Correa, F.Trajtenberg, G.Obal, O.Pritsch, G.Dighiero, P.Oppezzo, A.Buschiazzo.
Ref. Acta Crystallogr D Biol Crystallogr, 2013, 69, 388-397. [DOI no: 10.1107/S0907444912048664]
PubMed id 23519414
Abstract
Despite being the most abundant class of immunoglobulins in humans and playing central roles in the adaptive immune response, high-resolution structural data are still lacking for the antigen-binding region of human isotype A antibodies (IgAs). The crystal structures of a human Fab fragment of IgA1 in three different crystal forms are now reported. The three-dimensional organization is similar to those of other Fab classes, but FabA1 seems to be more rigid, being constrained by a hydrophobic core in the interface between the variable and constant domains of the heavy chain (VH-CH1) as well as by a disulfide bridge that connects the light and heavy chains, influencing the relative heavy/light-chain orientation. The crystal structure of the same antibody but with a G-isotype CH1 which is reported to display different antigen affinity has also been solved. The differential structural features reveal plausible mechanisms for constant/variable-domain long-distance effects whereby antibody class switching could alter antigen affinity.
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 Headers

 

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