PDBsum entry 3qmz Go to PDB code:  Pore analysis for: 3qmz calculated with MOLE 2.0 PDB id 3qmz Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.75 1.75 41.4 -0.39 -0.05 14.0 73 6 2 1 6 4 0 0   2 2.18 2.19 56.0 0.33 -0.21 5.8 78 5 1 9 17 5 2 3   3 2.18 2.78 61.0 0.17 -0.35 5.6 83 3 5 12 23 3 1 1   4 2.42 2.64 71.4 0.50 -0.16 6.3 78 7 6 10 25 4 3 1   5 1.54 1.54 72.5 -0.49 -0.21 10.4 79 5 6 13 15 4 0 0   6 1.73 1.73 104.2 -0.43 -0.29 12.7 76 7 10 8 13 8 0 1   7 1.94 2.11 105.3 -0.17 -0.21 10.9 77 6 11 9 16 10 0 1   8 2.20 2.45 118.2 -0.58 -0.18 13.4 77 9 9 11 17 12 4 0   9 2.08 2.08 124.2 -0.29 -0.25 8.3 80 11 7 21 28 9 2 0   10 2.41 2.60 127.7 0.04 -0.33 8.4 85 11 7 14 36 8 6 1   11 2.48 2.50 140.8 -0.13 -0.37 8.4 87 11 11 21 33 9 5 0   12 1.80 1.80 142.2 0.31 -0.10 9.9 76 11 11 3 36 8 10 4   13 1.78 1.81 141.5 -0.05 -0.24 7.2 78 10 8 14 31 9 8 1   14 1.80 1.80 143.8 -0.04 -0.24 9.6 80 9 12 11 34 8 10 3   15 1.75 1.80 153.6 -0.07 -0.29 8.2 80 13 16 13 35 15 7 0   16 1.80 1.80 160.9 0.31 0.04 7.8 73 12 15 11 29 19 8 4   17 2.18 2.51 165.8 -0.30 -0.07 13.7 76 11 8 10 20 16 3 0   18 1.96 2.00 166.2 -0.05 -0.17 10.3 89 17 17 22 34 9 7 1   19 2.43 2.70 171.6 0.16 0.09 9.6 74 9 14 10 38 16 1 1   20 1.73 1.74 177.7 -0.56 -0.10 14.3 75 14 8 13 22 17 3 0   21 2.11 2.06 208.5 -0.66 -0.12 16.8 85 17 22 23 35 12 9 2   22 1.86 2.12 218.2 -0.22 -0.12 12.4 78 12 14 22 34 19 3 1   23 1.85 2.11 220.3 0.02 -0.17 10.7 84 18 22 26 44 13 7 3   24 1.84 2.00 237.8 0.09 -0.14 10.1 85 19 17 28 49 11 8 4   25 1.69 1.79 234.0 0.13 -0.10 9.4 85 21 22 23 57 15 9 1   26 1.88 2.10 247.0 -0.37 -0.19 10.9 85 19 22 37 45 13 8 2   27 2.08 2.43 278.7 -0.30 -0.05 14.0 78 18 11 23 37 27 6 0   28 2.03 2.08 305.2 -0.16 -0.12 10.5 79 18 17 31 53 21 3 1   29 1.75 2.06 356.7 -0.12 -0.12 11.9 83 28 22 34 64 24 12 2   30 2.07 2.06 397.4 -0.32 -0.13 10.8 79 26 17 33 56 28 10 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.