PDBsum entry 3qeu

Pore analysis for: 3qeu calculated with

MOLE 2.0

PDB id

3qeu

Pores calculated on whole structure

Pores calculated excluding ligands

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17 pores, coloured by radius

16 pores, coloured by radius

16 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

4.16

5.08

25.8

-2.94

-0.78

25.7

82

4

5

3

0

1

0

0

2

1.99

2.14

25.9

0.89

0.45

9.6

77

2

1

1

2

4

0

0

GOL 246 B

3

1.35

1.57

32.6

-0.35

0.15

20.3

78

4

3

2

4

3

0

0

GOL 246 B

4

2.77

2.77

32.7

-1.45

-0.45

16.4

80

3

4

4

0

1

1

2

5

1.99

2.14

36.9

-1.46

-0.59

26.4

76

0

6

2

2

5

0

0

6

2.11

3.63

38.3

-0.16

0.03

13.2

81

3

3

2

2

3

0

0

GOL 246 B

7

2.11

3.63

39.7

-0.72

-0.36

14.9

78

1

3

2

1

3

0

0

8

2.34

2.57

46.0

-2.81

-0.71

32.6

81

4

8

3

1

2

0

0

9

2.11

3.63

49.3

-1.61

-0.63

23.5

77

1

6

3

1

4

0

0

10

2.11

3.63

53.8

-1.73

-0.57

19.9

88

5

2

4

0

2

0

0

11

1.99

2.14

61.5

-1.51

-0.43

20.7

79

5

7

4

1

4

1

2

12

2.11

3.63

76.0

-1.83

-0.57

21.1

79

6

8

5

0

4

1

2

13

2.32

2.69

76.7

-1.62

-0.50

14.5

78

4

6

8

1

3

3

2

14

1.71

3.51

78.3

-1.88

-0.56

20.6

80

4

6

5

3

0

2

0

15

1.58

2.55

114.3

-1.63

-0.44

18.5

81

6

7

10

4

1

3

2

16

1.66

1.66

29.6

-1.06

-0.61

6.7

74

2

0

3

0

2

1

0

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.