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PDBsum entry 3qcu

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 3qcu calculated with MOLE 2.0 PDB id
3qcu
Pores calculated on whole structure Pores calculated excluding ligands

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6 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 3.31 3.41 31.3 -1.70 -0.37 12.6 83 2 1 5 1 5 2 0  
2 3.00 3.18 44.1 -1.35 -0.63 10.5 88 2 4 6 0 4 2 0  
3 2.40 2.42 51.8 -0.87 -0.33 10.1 76 2 2 3 5 1 3 0  
4 2.00 2.01 64.8 -0.75 -0.43 6.5 82 1 2 5 3 2 3 0  
5 3.09 3.18 70.5 -1.88 -0.69 18.2 79 4 4 4 2 0 4 0  
6 2.37 2.39 73.6 -1.70 -0.64 15.5 83 3 3 5 4 1 3 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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