PDBsum entry 3qa0 Go to PDB code:  Tunnel analysis for: 3qa0 calculated with MOLE 2.0 PDB id 3qa0 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.58 1.68 27.3 0.02 0.08 16.3 80 3 2 1 6 2 0 0   2 1.58 1.69 36.5 -0.43 0.07 18.8 75 7 2 0 6 3 0 0  SO4 339 A 3 1.27 2.98 33.3 0.55 0.57 9.2 79 2 1 1 8 3 0 0   4 1.21 1.26 15.7 -0.63 -0.01 12.0 85 3 1 1 2 2 0 0   5 1.22 1.38 15.0 0.59 -0.05 4.2 75 1 0 0 4 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.