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PDBsum entry 3q8l
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Pore analysis for: 3q8l calculated with  MOLE 2.0
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PDB id
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3q8l
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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4 pores,
coloured by radius |
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4 pores,
coloured by radius
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4 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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3.58 |
3.58 |
26.2 |
-2.65 |
-0.72 |
22.5 |
77 |
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3 |
0 |
1 |
0 |
0 |
0 |
0 |
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DT 3 D DC 4 D DT 5 D DG 6 D DC 7 D DG 5 E DG 6 E
DC 7 E
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2 |
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2.25 |
2.30 |
42.3 |
-2.73 |
-0.56 |
31.4 |
79 |
6 |
2 |
1 |
1 |
0 |
1 |
0 |
DG 6 D DC 7 D DC 8 D DT 9 D DC 10 D DT 1 E DG 3 E
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3 |
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2.26 |
2.29 |
49.7 |
-2.77 |
-0.60 |
28.8 |
80 |
6 |
1 |
1 |
1 |
0 |
1 |
0 |
DT 3 D DC 4 D DT 5 D DC 7 D DC 8 D DT 9 D DC 10 D
DT 1 E DG 3 E DA 4 E DG 5 E DG 6 E DC 7 E
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4 |
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1.90 |
1.91 |
108.6 |
-1.90 |
-0.58 |
21.8 |
81 |
7 |
2 |
2 |
2 |
0 |
1 |
0 |
DT 3 D DC 4 D DT 5 D DC 7 D DC 8 D DT 9 D DC 10 D
DA 11 D DA 12 D DT 1 E DG 3 E DA 4 E DG 5 E DG 6
E DC 7 E DA 1 F DC 2 F DC 3 F DG 4 F DT 5 F
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program