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PDBsum entry 3q5i

Go to PDB code: 
protein ligands metals links
Transferase PDB id
3q5i

 

 

 

 

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JSmol PyMol  
Contents
Protein chain
470 a.a.
Ligands
ANP
Metals
_MG
_CA ×6
Waters ×222
PDB id:
3q5i
Name: Transferase
Title: Crystal structure of pbanka_031420
Structure: Protein kinase. Chain: a. Engineered: yes
Source: Plasmodium berghei. Organism_taxid: 5821. Strain: anka. Gene: pb000158.03.0, pbanka_031420. Expressed in: escherichia coli. Expression_system_taxid: 562.
Resolution:
2.10Å     R-factor:   0.197     R-free:   0.250
Authors: A.K.Wernimont,A.Hutchinson,H.Sullivan,E.Panico,L.Crombet,D.Cossar, A.Hassani,M.Vedadi,C.H.Arrowsmith,A.M.Edwards,C.Bountra,J.Weigelt, R.Hui,A.M.Neculai,M.Amani,Structural Genomics Consortium (Sgc)
Key ref: A.K.Wernimont et al. Crystal structure of cdpk1 from plasmodium bergheii, Pbanka_031420. To be published, .
Date:
28-Dec-10     Release date:   01-Jun-11    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chain
A0A509AHB6  (CDPK1_PLABA) -  Calcium-dependent protein kinase 1 from Plasmodium berghei (strain Anka)
Seq:
Struc:
 
Seq:
Struc:
523 a.a.
470 a.a.*
Key:    Secondary structure  CATH domain
* PDB and UniProt seqs differ at 9 residue positions (black crosses)

 Enzyme reactions 
   Enzyme class: E.C.2.7.11.1  - non-specific serine/threonine protein kinase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction:
1. L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H+
2. L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H+
L-seryl-[protein]
+ ATP
= O-phospho-L-seryl-[protein]
Bound ligand (Het Group name = ANP)
matches with 81.25% similarity
+ ADP
+ H(+)
L-threonyl-[protein]
+ ATP
= O-phospho-L-threonyl-[protein]
Bound ligand (Het Group name = ANP)
matches with 81.25% similarity
+ ADP
+ H(+)
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

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