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PDBsum entry 3q29

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 3q29 calculated with MOLE 2.0 PDB id
3q29
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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10 tunnels, coloured by tunnel radius 10 tunnels, coloured by tunnel radius 10 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.30 13.3 0.83 0.22 1.6 83 0 0 1 5 2 1 0  
2 1.92 8.4 0.31 -0.23 12.2 90 0 3 0 2 0 0 0  
3 1.48 7.0 0.37 -0.06 9.6 91 1 0 1 2 0 0 0  
4 1.48 7.0 0.37 -0.06 9.6 91 1 0 1 2 0 0 0  
5 2.10 8.4 0.24 -0.16 12.4 95 1 1 0 3 0 0 0  
6 1.86 10.4 -0.12 -0.36 10.8 92 1 0 0 4 0 0 0  
7 1.66 16.3 -0.03 -0.16 14.4 95 1 1 0 3 0 0 0  
8 1.67 16.3 -0.24 -0.21 15.7 95 1 1 0 3 0 0 0  
9 1.39 11.6 -0.78 -0.27 14.6 85 2 0 1 1 0 1 0  
10 1.39 5.6 1.39 0.00 2.0 86 0 0 0 4 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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