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PDBsum entry 3q25

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Tunnel analysis for: 3q25 calculated with MOLE 2.0 PDB id
3q25
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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8 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 2.01 6.0 0.26 -0.29 8.5 92 1 0 0 3 0 1 0  
2 1.88 8.4 0.34 -0.06 12.0 95 1 1 0 3 0 0 0  
3 1.59 8.9 0.15 -0.11 12.3 91 1 0 1 2 0 0 0  
4 1.58 17.4 -0.14 -0.22 13.5 95 1 1 0 3 0 0 0  
5 1.86 5.2 0.19 0.24 11.3 86 1 1 1 2 0 0 0  
6 1.89 10.8 -1.59 -0.78 15.9 96 1 1 2 2 0 0 0  
7 1.63 6.3 -0.61 -0.20 12.5 87 1 0 1 1 0 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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