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PDBsum entry 3q1k

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 3q1k calculated with MOLE 2.0 PDB id
3q1k
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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10 tunnels, coloured by tunnel radius 10 tunnels, coloured by tunnel radius 10 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.58 8.0 -0.41 -0.28 2.1 90 0 0 2 2 0 1 1  
2 1.47 7.7 0.52 0.28 15.6 86 1 1 1 4 0 0 0  
3 1.98 11.1 -0.83 0.05 12.5 78 2 0 2 2 2 0 0  
4 1.61 6.1 -0.75 -0.46 2.4 94 0 0 1 3 0 1 0  
5 1.61 7.2 -0.94 -0.48 2.3 98 0 0 2 2 0 1 0  
6 1.67 8.2 -0.72 -0.09 7.5 75 1 0 2 2 1 0 0  
7 1.82 5.0 1.60 0.52 1.5 89 0 0 2 3 0 0 0  
8 1.69 7.2 1.48 0.43 1.7 89 0 0 2 3 0 0 0  
9 2.96 10.6 -0.59 0.12 3.9 60 1 0 1 2 1 0 0  
10 3.08 9.3 -0.59 0.12 3.9 60 1 0 1 2 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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