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PDBsum entry 3pyt

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Top Page protein dna_rna metals Protein-protein interface(s) links
Protein chain V PDB id
3pyt
Protein chain V highlighted
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Jmol
Motifs
Secondary structure
Wiring diagram
Residue conservation
ProMotif
4 sheets
3 beta hairpins
3 beta bulges
13 strands
16 beta turns
3 gamma turns
Chain 271 a.a.
Chain 204 a.a.
Chain 202 a.a.
Chain 181 a.a.
Chain 159 a.a.
Chain 145 a.a.
Chain 32 a.a.
Chain 137 a.a.
Chain 122 a.a.
Chain 146 a.a.
Chain 136 a.a.
Chain 117 a.a.
Chain 98 a.a.
Chain 137 a.a.
Chain 116 a.a.
Chain 101 a.a.
Chain 112 a.a.
Chain 92 a.a.
Chain 100 a.a.
Chain 188 a.a.
Chain 76 a.a.
Chain 88 a.a.
Chain 62 a.a.
Chain 59 a.a.
Chain 30 a.a.
Chain 52 a.a.
Chain 44 a.a.
Chain 48 a.a.
Chain 63 a.a.
  
Chain (188 residues)

UniProt code: Q72IA7 (RL25_THET2)   [Pfam]

structural classification (2 domains) :
Domain Links CATH no.   Class Architecture
1 2.40.240.10 = Mainly Beta Beta Barrel
2 2.170.120.20 = Mainly Beta Beta Complex

Key:  
Sec. struc: Helices labelled H1, H2, ... and strands by their sheets A, B, ...
  Helix Strand  
Motifs:   
    beta turn     gamma turn     beta hairpin

Jmol
RasMol

FASTA
file
Domain 1
Topology diagram


Hera


Domain 2
Topology diagram


Hera


  Analysis of sequence's residue conservation
  Related protein sequences in the PDB
  
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