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PDBsum entry 3pyk

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Cleft analysis for: 3pyk PDB id
3pyk
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 3110.91 2.88 64.75 3 11.81 1 14.42 1 10 6 9 12 8 10 0 SRX 263[A], SO4 421[A] (30 atoms)
2 1081.27 0.00 63.30 5 7.70 5 7.48 6 6 3 6 2 2 6 0  
3 939.09 0.00 56.71 9 6.26 8 8.68 2 6 1 2 3 5 2 0  
4 847.97 0.00 56.33 10 4.26 10 6.91 8 3 2 3 5 1 4 0  
5 456.47 0.00 72.84 2 10.32 2 8.24 3 4 1 2 2 1 4 0  
6 636.19 0.00 63.18 6 8.06 4 7.52 5 3 2 3 6 1 2 0  
7 605.39 0.00 59.44 7 6.65 7 7.40 7 2 3 2 1 2 3 0  
8 391.92 0.00 63.66 4 8.68 3 6.47 9 2 2 5 1 2 0 0  
9 497.81 0.00 57.37 8 4.51 9 6.39 10 2 2 3 3 0 2 1 MMC 264[A] (2 atoms)
10 280.97 0.00 76.35 1 6.67 6 7.94 4 5 1 1 0 3 1 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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