PDBsum entry 3pxj Go to PDB code:  Tunnel analysis for: 3pxj calculated with MOLE 2.0 PDB id 3pxj Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.48 2.04 28.4 -1.24 -0.28 16.6 83 3 4 2 3 1 2 0   2 1.53 2.17 29.6 -2.29 -0.52 22.0 85 3 1 4 1 1 1 0   3 1.47 2.09 30.4 -1.41 -0.31 13.8 84 2 2 4 2 1 2 0   4 1.15 1.29 41.1 -1.86 -0.41 20.8 82 5 2 3 1 2 1 0   5 1.47 1.66 44.1 -0.42 -0.01 11.1 80 3 1 3 6 3 2 0   6 1.47 2.01 49.9 -0.93 0.01 13.8 82 5 1 8 4 3 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.