PDBsum entry 3pvu Go to PDB code:  Tunnel analysis for: 3pvu calculated with MOLE 2.0 PDB id 3pvu Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.24 2.60 28.4 -1.82 -0.24 22.5 86 3 2 3 3 1 2 0   2 1.23 2.56 36.4 -1.14 -0.35 16.2 81 4 1 5 3 2 3 2   3 1.24 2.62 39.2 -1.05 -0.32 16.4 86 3 1 5 5 1 2 2   4 1.22 1.47 22.9 -0.04 -0.23 12.0 84 2 3 2 8 0 0 0  QRW 800 A 5 1.41 1.53 19.8 -1.17 -0.29 24.2 85 3 2 1 4 0 0 0   6 1.19 1.31 15.7 -0.24 -0.02 13.2 71 1 2 1 2 2 2 0   7 1.19 1.30 20.6 -0.35 -0.09 10.1 74 0 3 1 3 2 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.