PDBsum entry 3pv6 Go to PDB code:  Tunnel analysis for: 3pv6 calculated with MOLE 2.0 PDB id 3pv6 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   8 tunnels, coloured by tunnel radius 8 tunnels, coloured by tunnel radius 8 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.85 1.92 15.5 -0.01 0.06 8.4 65 1 0 1 5 2 2 0   2 1.56 1.71 15.6 0.15 0.24 13.2 70 2 1 0 4 2 0 0   3 1.97 2.03 15.9 -0.41 0.03 15.5 75 2 1 0 5 1 0 0   4 1.85 1.92 18.0 -0.03 0.07 8.1 65 1 0 1 5 2 2 0   5 1.86 2.42 18.1 -1.71 -0.58 18.7 84 1 1 2 2 1 0 0   6 1.86 2.42 18.1 -1.62 -0.55 17.5 82 1 1 2 1 1 0 0   7 1.86 2.50 24.4 -2.22 -0.52 27.9 81 4 3 1 3 1 0 0   8 1.86 2.50 24.4 -2.15 -0.49 27.1 80 4 3 1 2 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.