spacer
spacer

PDBsum entry 3psc

Go to PDB code: 
Top Page protein Protein-protein interface(s) tunnels links
Tunnel analysis for: 3psc calculated with MOLE 2.0 PDB id
3psc
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.40 1.70 16.6 -0.89 -0.07 21.3 70 1 2 0 4 2 1 1  
2 1.39 1.70 24.6 -0.80 -0.05 19.6 69 1 3 0 5 2 1 1  
3 1.34 2.57 27.2 -1.72 -0.19 22.7 88 3 2 3 3 1 1 0  
4 1.33 2.42 34.3 -0.93 -0.25 16.9 90 3 1 5 5 1 1 1  
5 1.39 2.08 16.0 -2.09 -0.48 30.6 89 3 2 1 1 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer