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PDBsum entry 3prd

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Tunnel analysis for: 3prd calculated with MOLE 2.0 PDB id
3prd
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.26 16.1 0.34 0.06 16.6 78 2 2 0 4 1 0 0  
2 1.27 18.4 0.63 0.19 14.9 78 2 2 0 5 2 0 0  
3 1.26 23.6 -0.20 -0.05 20.3 79 3 2 0 4 1 0 0  
4 1.52 3.5 -1.12 -0.79 10.5 94 1 0 1 0 0 0 0  
5 1.58 3.9 -1.10 -0.78 9.0 98 1 0 1 0 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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