PDBsum entry 3po5 Go to PDB code:  Pore analysis for: 3po5 calculated with MOLE 2.0 PDB id 3po5 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 pores, coloured by radius 7 pores, coloured by radius 7 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.18 1.31 52.7 -1.53 -0.68 19.6 86 6 4 2 3 0 0 0  GOL 1 B DA 105 B DC 106 B DG 107 B DG 108 B DC 109 B DG 110 B DC 111 B DT 205 C DG 206 C DC 207 C DC 210 C DG 211 C 2 1.19 1.31 57.5 -1.68 -0.69 21.2 88 6 4 3 3 0 0 0  DG 108 B DC 109 B DG 110 B DC 111 B 3DR 204 C DT 205 C DC 210 C DG 211 C 3 1.20 1.32 60.5 -2.02 -0.70 21.6 83 7 4 3 2 0 1 0  DDS 835 A DC 109 B DG 110 B DC 210 C DG 211 C 4 1.20 1.32 68.6 -1.96 -0.68 25.9 84 7 5 1 3 0 0 0  DC 106 B DG 107 B DG 108 B DC 109 B DG 110 B DC 111 B 3DR 204 C DT 205 C DC 210 C DG 211 C DT 212 C DG 213 C DG 214 C 5 3.26 3.46 71.5 -2.22 -0.62 28.2 84 8 4 2 4 0 1 0  DDS 835 A DG 108 B DC 109 B DG 110 B DC 111 B DT 205 C 6 1.17 1.32 71.6 -2.18 -0.69 25.1 79 8 5 1 2 0 1 0  DDS 835 A DC 106 B DG 107 B DG 108 B DC 109 B DG 110 B DC 210 C DG 211 C DT 212 C DG 213 C DG 214 C 7 1.21 2.38 29.7 1.11 0.32 7.3 83 2 1 2 6 2 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.