PDBsum entry 3pnw Go to PDB code:  Pore analysis for: 3pnw calculated with MOLE 2.0 PDB id 3pnw Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   43 pores, coloured by radius 39 pores, coloured by radius 39 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 3.43 3.44 25.1 -1.55 -0.59 10.5 79 2 1 2 0 0 3 0  UNX 1926 Q 2 3.03 3.13 27.0 -1.15 -0.41 20.3 88 2 2 3 3 2 0 0   3 3.57 3.57 29.4 -1.13 -0.34 15.4 85 3 1 4 2 1 0 0   4 2.90 3.37 38.0 -1.10 -0.22 11.7 85 4 2 6 2 3 1 0   5 4.13 4.71 44.6 -1.61 -0.65 13.6 88 3 3 5 1 1 2 0  UNX 1890 T UNX 1898 T UNX 1940 T 6 3.53 3.53 45.8 -1.03 -0.62 11.6 87 2 3 5 2 0 3 0  UNX 1890 T UNX 1898 T UNX 1940 T UNX 1951 W 7 3.34 3.33 51.0 -0.71 -0.51 6.3 85 2 1 5 2 1 3 0   8 3.78 3.94 57.1 -1.12 -0.38 14.1 81 5 3 4 2 3 2 0  UNX 1890 T UNX 1898 T UNX 1940 T 9 3.67 5.10 57.8 -2.11 -0.71 19.0 88 5 3 7 1 1 1 0  UNX 1967 N UNX 1968 N UNX 1901 Q 10 3.34 3.33 62.1 -0.84 -0.54 10.6 82 5 3 3 4 1 3 0  UNX 1967 N UNX 1968 N 11 3.13 3.13 73.6 -0.93 -0.64 7.0 86 5 2 7 3 0 7 0  UNX 1890 T UNX 1898 T UNX 1924 T UNX 1940 T UNX 1857 W UNX 1874 W 12 3.41 3.41 76.3 -1.17 -0.61 12.0 84 6 1 6 3 1 2 0  UNX 1901 Q UNX 1857 W 13 3.43 3.43 77.5 -1.33 -0.70 12.2 88 7 2 8 3 0 1 0  UNX 1967 N UNX 1968 N UNX 1857 W 14 3.35 3.34 78.4 -1.27 -0.52 13.7 83 5 4 4 3 2 4 0  UNX 1967 N UNX 1968 N UNX 1901 Q 15 3.50 3.78 80.1 -1.73 -0.77 13.6 92 4 4 11 1 1 1 0  UNX 1967 N UNX 1968 N UNX 1895 Q UNX 1901 Q UNX 1854 W 16 3.11 3.12 82.5 -1.26 -0.47 10.5 84 8 1 10 3 3 5 0  UNX 1924 T UNX 1857 W UNX 1874 W 17 3.23 3.73 83.8 -0.80 -0.33 8.9 82 6 1 7 5 4 1 0  UNX 1967 N UNX 1968 N UNX 1857 W 18 3.11 3.12 88.0 -1.05 -0.58 10.9 89 6 2 11 4 0 4 0  UNX 1924 T UNX 1857 W UNX 1874 W UNX 1951 W 19 1.76 1.76 32.5 -0.49 -0.54 8.6 86 1 2 2 1 1 2 0  UNX 1943 A UNX 1972 A 20 2.49 2.49 33.4 -0.82 -0.69 6.5 83 1 2 2 1 1 2 0  UNX 1972 A UNX 1914 B 21 0.98 1.33 41.3 -1.11 -0.21 7.9 81 1 1 6 2 4 1 0   22 2.85 4.23 42.4 -1.57 -0.63 16.9 91 5 2 6 3 0 1 0   23 3.38 3.38 47.6 -0.83 -0.61 8.9 91 4 1 5 3 1 0 0   24 2.69 4.24 49.3 -0.62 -0.42 7.7 88 2 2 7 7 1 4 0  UNX 1902 B UNX 1948 H 25 3.21 3.21 51.2 -1.23 -0.65 11.1 89 4 2 7 2 1 1 0   26 3.14 3.76 51.2 -1.41 -0.74 12.4 90 6 2 8 1 0 0 0   27 2.45 2.59 52.3 -1.08 -0.52 7.9 81 3 1 4 1 1 4 0  UNX 1882 K 28 2.85 4.24 61.6 -1.60 -0.61 16.0 92 6 3 7 4 1 1 0   29 2.49 2.60 62.2 -0.95 -0.52 8.9 79 3 1 3 3 1 3 0  UNX 1882 K 30 2.39 2.60 65.2 -1.67 -0.50 14.8 83 5 3 5 3 1 4 0  UNX 1882 K 31 3.50 4.19 65.8 -1.49 -0.69 12.3 92 6 3 9 2 1 0 0   32 3.47 3.47 66.8 -1.24 -0.55 12.9 85 5 1 6 3 1 2 0  UNX 1905 E 33 3.36 3.70 68.2 -0.66 -0.45 10.2 83 4 4 4 5 1 3 0  UNX 1870 H UNX 1920 H UNX 1935 H UNX 1962 H 34 3.11 3.67 70.2 -1.90 -0.62 17.0 85 7 4 8 2 1 2 0  UNX 1935 H UNX 1948 H 35 2.37 2.61 74.9 -1.06 -0.51 8.5 82 4 2 4 3 2 3 0  UNX 1882 K 36 3.11 3.65 78.8 -0.76 -0.46 9.2 84 5 2 6 4 1 4 0  UNX 1870 H UNX 1920 H UNX 1948 H UNX 1962 H 37 3.14 3.64 86.4 -1.39 -0.66 13.5 87 7 3 10 4 0 2 0  UNX 1905 E UNX 1935 H UNX 1948 H 38 3.35 3.73 87.5 -1.03 -0.48 12.0 83 6 5 5 4 2 4 0  UNX 1870 H UNX 1920 H UNX 1935 H UNX 1962 H 39 1.18 1.26 91.0 -1.07 -0.44 8.1 86 6 2 12 3 4 3 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.