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PDBsum entry 3pnw
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Tunnel analysis for: 3pnw calculated with  MOLE 2.0
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PDB id
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3pnw
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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21 tunnels,
coloured by tunnel radius |
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29 tunnels,
coloured by
tunnel radius
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29 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.22 |
2.64 |
25.5 |
-0.11 |
-0.40 |
3.5 |
96 |
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1 |
0 |
7 |
4 |
1 |
0 |
0 |
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2 |
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1.22 |
2.63 |
26.1 |
-0.13 |
-0.45 |
1.9 |
96 |
0 |
0 |
7 |
4 |
1 |
0 |
0 |
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3 |
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1.23 |
1.25 |
15.5 |
-0.55 |
-0.35 |
4.4 |
81 |
1 |
0 |
2 |
1 |
2 |
1 |
0 |
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4 |
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1.23 |
1.25 |
20.9 |
-0.57 |
-0.32 |
4.1 |
84 |
1 |
0 |
2 |
1 |
2 |
1 |
0 |
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5 |
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1.29 |
1.29 |
26.5 |
-1.10 |
-0.20 |
10.6 |
70 |
1 |
1 |
3 |
2 |
4 |
1 |
0 |
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6 |
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1.28 |
1.28 |
28.7 |
-0.88 |
-0.22 |
7.8 |
74 |
0 |
1 |
4 |
3 |
3 |
2 |
0 |
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7 |
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1.10 |
2.50 |
20.3 |
-0.29 |
-0.03 |
5.4 |
69 |
0 |
1 |
1 |
2 |
4 |
1 |
0 |
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8 |
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1.17 |
1.16 |
16.6 |
0.45 |
-0.30 |
4.8 |
64 |
0 |
1 |
0 |
3 |
2 |
1 |
0 |
UNX 1939 D
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9 |
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1.16 |
1.16 |
22.6 |
0.60 |
-0.18 |
2.0 |
71 |
0 |
0 |
1 |
4 |
3 |
1 |
0 |
UNX 1939 D
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10 |
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1.22 |
1.35 |
17.4 |
0.65 |
-0.23 |
3.4 |
78 |
0 |
1 |
2 |
4 |
1 |
1 |
0 |
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11 |
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1.24 |
1.24 |
28.1 |
-1.24 |
-0.04 |
10.6 |
71 |
2 |
1 |
3 |
2 |
4 |
0 |
0 |
UNX 1850 H
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12 |
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1.24 |
1.24 |
28.6 |
-1.05 |
-0.05 |
9.1 |
72 |
1 |
1 |
3 |
3 |
3 |
1 |
0 |
UNX 1850 H
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13 |
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1.20 |
1.20 |
29.2 |
-0.98 |
-0.13 |
8.9 |
74 |
1 |
1 |
4 |
3 |
3 |
2 |
0 |
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14 |
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1.40 |
1.71 |
15.0 |
-0.31 |
-0.60 |
2.1 |
105 |
0 |
0 |
4 |
2 |
0 |
0 |
0 |
UNX 1966 M
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15 |
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1.37 |
1.72 |
24.1 |
-0.91 |
-0.71 |
4.3 |
104 |
1 |
0 |
8 |
2 |
0 |
0 |
0 |
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16 |
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1.31 |
1.77 |
18.8 |
-0.88 |
-0.73 |
2.4 |
103 |
0 |
0 |
5 |
2 |
0 |
0 |
0 |
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17 |
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1.30 |
1.77 |
20.7 |
-0.77 |
-0.70 |
2.1 |
105 |
0 |
0 |
7 |
2 |
0 |
0 |
0 |
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18 |
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1.57 |
2.62 |
20.9 |
-0.90 |
-0.77 |
2.2 |
106 |
0 |
0 |
7 |
1 |
0 |
0 |
0 |
UNX 1889 B
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19 |
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1.22 |
1.29 |
21.6 |
-0.87 |
-0.73 |
2.1 |
101 |
0 |
0 |
7 |
1 |
1 |
0 |
0 |
UNX 1889 B
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20 |
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1.28 |
1.83 |
21.9 |
-0.75 |
-0.72 |
2.1 |
105 |
0 |
0 |
7 |
2 |
0 |
0 |
0 |
UNX 1889 B
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21 |
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1.24 |
2.60 |
25.0 |
-0.23 |
-0.50 |
2.0 |
96 |
0 |
0 |
6 |
4 |
1 |
0 |
0 |
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22 |
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1.23 |
2.58 |
25.6 |
-0.21 |
-0.47 |
2.9 |
96 |
1 |
0 |
7 |
4 |
1 |
0 |
0 |
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23 |
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1.17 |
2.56 |
28.2 |
0.02 |
-0.42 |
1.7 |
96 |
0 |
0 |
8 |
5 |
1 |
0 |
0 |
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24 |
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1.11 |
1.11 |
18.1 |
0.16 |
-0.36 |
4.5 |
67 |
0 |
1 |
1 |
3 |
2 |
1 |
0 |
UNX 1879 V UNX 1932 V UNX 1971 V
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25 |
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1.12 |
1.12 |
18.1 |
0.11 |
-0.42 |
4.3 |
73 |
0 |
1 |
1 |
4 |
1 |
1 |
0 |
UNX 1879 V UNX 1932 V UNX 1971 V
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26 |
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1.26 |
2.52 |
15.4 |
-0.79 |
-0.56 |
2.5 |
87 |
0 |
0 |
7 |
2 |
1 |
0 |
0 |
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27 |
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1.63 |
1.70 |
16.5 |
-0.61 |
0.21 |
7.6 |
68 |
1 |
2 |
1 |
2 |
3 |
0 |
0 |
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28 |
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1.10 |
1.10 |
15.6 |
0.27 |
-0.39 |
4.2 |
74 |
0 |
1 |
0 |
3 |
1 |
1 |
0 |
UNX 1866 J UNX 1867 J
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29 |
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1.27 |
1.27 |
21.7 |
-0.51 |
-0.30 |
6.2 |
70 |
0 |
1 |
1 |
2 |
3 |
1 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program