PDBsum entry 3pmc Go to PDB code:  Tunnel analysis for: 3pmc calculated with MOLE 2.0 PDB id 3pmc Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   1 tunnel, coloured by tunnel radius 2 tunnels, coloured by tunnel radius 2 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.16 1.69 23.9 -0.42 0.19 18.2 93 2 2 4 5 0 0 0  IOD 405 A 2 1.53 1.53 38.1 0.09 0.22 13.5 76 4 2 1 8 4 1 0  IOD 401 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.