spacer
spacer

PDBsum entry 3pgc

Go to PDB code: 
Top Page protein ligands Protein-protein interface(s) links
Protein chain B    -    representing identical chain: E PDB id
3pgc
Protein chain B highlighted
(click to view)
 
Jmol
Motifs
Secondary structure
Wiring diagram
Residue conservation
ProMotif
3 sheets
7 beta hairpins
5 beta bulges
13 strands
5 helices
4 helix-helix interacs
21 beta turns
1 gamma turn
2 disulphides
PROSITE
IG_MHC
Chains 177 a.a.
Chains 184 a.a.
Chains 15 a.a.
  
Chain & (184 residues)

UniProt code: P04229 (2B11_HUMAN)   [Pfam]

structural classification (2 domains) :
Domain Links CATH no.   Class Architecture
1 3.10.320.10 = Alpha Beta Roll
2 2.60.40.10 = Mainly Beta Sandwich

Key:  
Sec. struc: Helices labelled H1, H2, ... and strands by their sheets A, B, ...
  Helix Strand  
Motifs:   
    beta turn     gamma turn     beta hairpin
Disulphides:   
    disulphide bond
Residue contacts:   
    to ligand
PROSITE patterns:   
Low   High conservation

Jmol
RasMol

FASTA
file
Domain 1
Topology diagram


Hera


Domain 2
Topology diagram


Hera


  Analysis of sequence's residue conservation
  Related protein sequences in the PDB
  
spacer
spacer