PDBsum entry 3pgc Go to PDB code:  Tunnel analysis for: 3pgc calculated with MOLE 2.0 PDB id 3pgc Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   8 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.15 1.79 33.5 -1.43 -0.47 21.0 80 4 4 1 1 2 0 0   2 1.16 1.70 45.4 -1.41 -0.36 18.3 77 5 5 3 2 3 1 0  PEG 193 D 3 1.16 1.70 45.6 -2.39 -0.58 29.6 78 6 8 3 2 2 0 0   4 1.16 1.72 56.5 -1.02 -0.40 19.6 84 5 6 2 7 2 0 0   5 1.14 1.69 69.3 -2.31 -0.54 30.8 78 10 9 2 5 3 0 0   6 1.19 2.01 15.9 -1.15 -0.19 16.7 71 1 1 1 3 2 1 0   7 1.18 2.00 19.7 -0.78 -0.18 12.5 73 1 1 1 4 2 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.