spacer
spacer

PDBsum entry 3pdz

Go to PDB code: 
Top Page protein clefts links
Cleft analysis for: 3pdz PDB id
3pdz
View options
Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 1554.61 2.74 61.27 5 11.02 1 11.62 1 5 1 5 2 2 5 0  
2 567.84 0.00 72.20 1 10.19 2 10.69 2 2 0 2 13 0 1 0  
3 226.55 0.00 62.37 4 6.62 3 6.08 6 0 2 2 3 0 0 0  
4 199.97 0.00 54.63 8 4.63 6 6.72 4 2 1 1 0 0 2 0  
5 243.00 0.00 51.13 9 4.02 7 5.52 8 0 0 4 3 0 2 0  
6 204.61 0.00 44.53 10 5.47 4 6.96 3 2 1 0 0 0 2 0  
7 123.19 0.00 55.38 7 1.61 10 5.59 7 2 1 1 1 0 0 0  
8 135.84 0.00 66.92 2 3.79 8 6.08 5 3 1 0 0 1 0 0  
9 136.27 0.00 62.37 3 5.30 5 4.46 10 0 1 1 5 0 0 0  
10 243.42 0.00 57.24 6 2.09 9 4.76 9 3 2 3 5 0 1 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
spacer
spacer