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Ligand clusters for UniProt code P04229

Ligand clusters for P04229: HLA class II histocompatibility antigen, DRB1-1 beta chain OS=Homo sapiens GN=HLA-DRB1 PE=1 SV=2

Top 6 (of 14) ligand clusters
Cluster 1.
3 ligand types
3 ligands
Cluster 2.
2 ligand types
2 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
2 ligand types
2 ligands
Cluster 6.
2 ligand types
3 ligands
Representative protein: 4ah2B  
 

Structures

PDB   Schematic diagram
4ah2B    
3s5lB    
1pywB    
1dlhB    
3pdoB    
 more ...

 

 Cluster 1 contains 3 ligand types

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Ligand Description


 
1. Ligand: ACE-PHE-VAL-LYS-GLN-ASN-ALA-MAA-ALA-LEU × 1
ACE=Acetyl group, MAA=N-Methyl-L-Alanine.
PDB code: 1pyw(B).


 
2. Ligand: ASN-CYS-LEU-LYS-LEU-ALA-THR × 1
PDB code: 4fqx(B).


 
3. Ligand: GLY-LYS-GLN-ASN-CYS-LEU-LYS-LEU-ALA-THR × 1
PDB code: 4gbx(B).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: NAG-NAG × 1
NAG=N-Acetyl-D-Glucosamine.
PDB code: 4fqx(B).


 
2. Ligand: NAG-NDG × 1
NAG=N-Acetyl-D-Glucosamine, NDG=2-(Acetylamino)-2-Deoxy-A-D-Glucopyranose.
PDB code: 1dlh(B).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: EPE × 1
4-(2-Hydroxyethyl)-1-Piperazine ethanesulfonic acid
PDB code: 2g9h(B).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: NDG × 1
2-(Acetylamino)-2-Deoxy-A-D-Glucopyranose
PDB code: 1dlh(B).

 

 Cluster 5 contains 2 ligand types

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Ligand Description


 
1. Ligand: DIO × 1
1,4-Diethylene dioxide
PDB code: 2g9h(B).


 
2. Ligand: GOL × 1
Glycerol
PDB code: 4ah2(B).

 

 Cluster 6 contains 2 ligand types

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Ligand Description

_Zn
 
1. Metal: _ZN × 2
PDB codes: 1hxy(B), 2g9h(B).


 
2. Ligand: GOL × 1
Glycerol
PDB code: 4aen(B).

 

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