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PDBsum entry 3pd9

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protein ligands metals Protein-protein interface(s) links
Membrane protein PDB id
3pd9

 

 

 

 

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Contents
Protein chains
258 a.a.
Ligands
HA5 ×2
SO4 ×4
GOL ×5
Metals
_CL ×4
Waters ×361
PDB id:
3pd9
Name: Membrane protein
Title: X-ray structure of the ligand-binding core of glua2 in complex with (r)-5-hpca at 2.1 a resolution
Structure: Glutamate receptor 2. Chain: a, b. Fragment: unp residues 413-527, 653-795. Synonym: glur-2, ampa-selective glutamate receptor 2, glur-b, glur- k2, glutamate receptor ionotropic, ampa 2, glua2. Engineered: yes
Source: Rattus norvegicus. Brown rat,rat,rats. Organism_taxid: 10116. Gene: glur2, gria2, rat. Expressed in: escherichia coli. Expression_system_taxid: 469008.
Resolution:
2.10Å     R-factor:   0.180     R-free:   0.233
Authors: K.Frydenvang,J.S.Kastrup
Key ref: K.Frydenvang et al. (2010). Biostructural and pharmacological studies of bicyclic analogues of the 3-isoxazolol glutamate receptor agonist ibotenic acid. J Med Chem, 53, 8354-8361. PubMed id: 21067182 DOI: 10.1021/jm101218a
Date:
22-Oct-10     Release date:   29-Dec-10    
PROCHECK
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 Headers
 References

Protein chains
Pfam   ArchSchema ?
P19491  (GRIA2_RAT) -  Glutamate receptor 2 from Rattus norvegicus
Seq:
Struc:
 
Seq:
Struc:
883 a.a.
258 a.a.*
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 2 residue positions (black crosses)

 

 
DOI no: 10.1021/jm101218a J Med Chem 53:8354-8361 (2010)
PubMed id: 21067182  
 
 
Biostructural and pharmacological studies of bicyclic analogues of the 3-isoxazolol glutamate receptor agonist ibotenic acid.
K.Frydenvang, D.S.Pickering, J.R.Greenwood, N.Krogsgaard-Larsen, L.Brehm, B.Nielsen, S.B.Vogensen, H.Hald, J.S.Kastrup, P.Krogsgaard-Larsen, R.P.Clausen.
 
  ABSTRACT  
 
No abstract given.

 

 

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