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PDBsum entry 3p9s

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 3p9s calculated with MOLE 2.0 PDB id
3p9s
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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10 tunnels, coloured by tunnel radius 10 tunnels, coloured by tunnel radius 10 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.27 119.3 -0.73 -0.13 15.6 75 12 7 5 12 13 1 0  760 HDD C
2 1.31 13.7 0.05 -0.04 15.8 75 1 2 1 2 3 0 0  
3 1.82 13.3 -1.41 -0.37 16.6 83 2 1 1 2 1 1 0  
4 1.66 3.4 -1.32 -0.50 20.8 71 1 2 0 0 1 0 0  
5 1.44 11.5 1.23 0.00 1.9 64 0 0 0 4 0 1 0  
6 1.32 9.4 -0.96 -0.51 15.9 75 2 1 0 2 0 1 0  
7 1.58 5.9 -2.47 -0.89 22.1 85 1 2 1 0 0 0 0  
8 1.57 7.7 -1.80 -0.78 23.2 79 1 2 1 1 0 0 0  
9 1.33 12.8 -2.11 -0.46 30.2 70 2 1 0 1 0 1 0  
10 1.31 7.8 0.16 -0.29 12.0 72 1 1 0 3 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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