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Ligand clusters for UniProt code P21179

Ligand clusters for P21179: Catalase HPII OS=Escherichia coli (strain K12) GN=katE PE=1 SV=1

3 ligand clusters
Cluster 1.
7 ligand types
43 ligands
Cluster 2.
6 ligand types
40 ligands
Cluster 3.
1 ligand type
1 ligand
Representative protein: 4bflA  
 

Structures

PDB   Schematic diagram
4bflA    
1ggkA    
1iphA    
3vu3A    
1gg9A    
 more ...

 

 Cluster 1 contains 7 ligand types

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Ligand Description


 
1. Ligand: HDD × 5
Cis-Heme d hydroxychlorin gamma-Spirolactone
PDB codes: 1gge(A), 1ggj(A), 1p81(A), 1ye9(A),


 
2. Ligand: HEM × 20
Protoporphyrin IX containing fe
PDB codes: 1cf9(A), 1gg9(A), 1ggh(A), 1ggk(A), 1iph(A), 1p7y(A), 1p7z(A), 1p80(A), 1qf7(A), 1qws(A), 3ttt(A), 3ttu(A), 3ttv(A), 3ttw(A), 3ttx(A), 3vu3(A), 4bfl(A), 4enp(A), 4enr(A), 4ent(A).


 
3. Ligand: HDD × 5
Cis-Heme d hydroxychlorin gamma-Spirolactone
PDB codes: 3p9r(A), 4enq(A), 4ent(A), 4enu(A), 4enw(A).


 
4. Ligand: HDD-HDE × 9
HDD=Cis-Heme d hydroxychlorin gamma-Spirolactone, HDE=Cis-Heme d hydroxychlorin gamma-Spirolactone 17r, 18s.
PDB codes: 3p9q(A), 3p9s(A), 3pq2(A), 3pq3(A), 3pq4(A), 3pq5(A), 3pq6(A), 3pq7(A), 3pq8(A).


 
5. Ligand: HDD-HEM × 2
HDD=Cis-Heme d hydroxychlorin gamma-Spirolactone, HEM=Protoporphyrin IX containing fe.
PDB codes: 4ens(A), 4env(A).


 
6. Ligand: HEM-HDE-HEM-HDD × 1
HEM=Protoporphyrin IX containing fe, HDE=Cis-Heme d hydroxychlorin gamma-Spirolactone 17r, 18s, HDD=Cis-Heme d hydroxychlorin gamma-Spirolactone.
PDB code: 3p9p(A).


 
7. Ligand: HEM-PEO × 1
HEM=Protoporphyrin IX containing fe, PEO=Hydrogen peroxide.
PDB code: 1ggf(A).

 

 Cluster 2 contains 6 ligand types

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Ligand Description


 
1. Ligand: HDD × 4
Cis-Heme d hydroxychlorin gamma-Spirolactone
PDB codes: 1gge(A), 1ggj(A), 1p81(A), 1ye9(A).


 
2. Ligand: HEM × 23
Protoporphyrin IX containing fe
PDB codes: 1cf9(A), 1gg9(A), 1ggf(A), 1ggh(A), 1ggk(A), 1iph(A), 1p7y(A), 1p7z(A), 1p80(A), 1qf7(A), 1qws(A), 3p9p(A), 3ttt(A), 3ttu(A), 3ttv(A), 3ttw(A), 3ttx(A), 4bfl(A), 4enp(A), 4enr(A), 4ent(A), 4env(A).


 
3. Ligand: HDD-HDE × 8
HDD=Cis-Heme d hydroxychlorin gamma-Spirolactone, HDE=Cis-Heme d hydroxychlorin gamma-Spirolactone 17r, 18s.
PDB codes: 3p9q(A), 3pq2(A), 3pq3(A), 3pq4(A), 3pq5(A), 3pq6(A), 3pq7(A), 3pq8(A).


 
4. Ligand: HDD × 3
Cis-Heme d hydroxychlorin gamma-Spirolactone
PDB codes: 3p9r(A), 4ent(A), 4enu(A).


 
5. Ligand: HDD-HEM × 1
HDD=Cis-Heme d hydroxychlorin gamma-Spirolactone, HEM=Protoporphyrin IX containing fe.
PDB code: 4ens(A).


 
6. Ligand: HDE × 1
Cis-Heme d hydroxychlorin gamma-Spirolactone 17r, 18s
PDB code: 3p9s(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 4bfl(A).

 

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