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PDBsum entry 3p9i

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 3p9i calculated with MOLE 2.0 PDB id
3p9i
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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10 tunnels, coloured by tunnel radius 9 tunnels, coloured by tunnel radius 9 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.27 40.0 0.78 0.61 10.6 79 2 4 3 8 5 0 0  401 SAH A,601 SNY A
2 1.28 41.1 0.80 0.56 11.1 81 2 4 4 8 4 0 0  401 SAH A,601 SNY A
3 1.36 16.0 -2.65 -0.35 32.2 73 3 2 1 1 2 0 0  
4 1.78 10.5 -2.77 -0.64 34.3 76 3 1 1 0 1 0 0  
5 1.29 4.5 -2.20 -0.39 39.8 67 1 1 0 1 0 0 0  
6 1.28 5.8 -1.20 -0.50 17.4 84 1 1 0 2 1 0 0  
7 1.81 4.5 0.62 -0.08 8.2 83 1 0 0 2 1 0 0  
8 1.89 6.4 0.46 -0.07 8.3 83 1 0 1 2 1 0 0  
9 1.48 9.6 -1.17 -0.30 13.1 82 2 1 0 1 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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