spacer
spacer

PDBsum entry 3p4x

Go to PDB code: 
Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 3p4x calculated with MOLE 2.0 PDB id
3p4x
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
13 pores, coloured by radius 11 pores, coloured by radius 11 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.02 2.60 31.6 -0.77 -0.28 19.8 85 5 4 3 5 0 0 0  
2 1.45 1.52 32.2 -2.05 -0.38 29.1 83 7 3 2 2 0 0 0  
3 1.28 2.41 37.0 -1.13 0.05 19.0 74 2 4 3 5 3 0 0  
4 1.27 1.27 42.0 -0.79 -0.18 16.1 81 8 2 3 4 1 1 0  
5 1.36 1.36 51.8 -1.03 -0.43 15.8 88 6 1 4 7 0 1 0  
6 1.28 1.28 52.1 -0.88 -0.38 15.6 83 8 2 4 5 1 1 0  
7 1.53 1.53 57.9 -0.93 -0.31 18.1 85 9 4 5 6 0 0 0  
8 1.27 1.27 65.4 -1.02 -0.20 19.1 79 7 4 4 9 2 1 0  
9 1.75 1.92 65.4 -0.69 -0.28 14.7 87 9 3 5 10 0 0 0  
10 1.53 1.78 76.6 -1.10 -0.16 20.7 80 11 7 4 10 1 0 0  
11 2.37 2.69 120.9 -1.02 -0.47 15.0 86 6 9 3 7 1 3 0  MG 799 A ADP 800 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer