PDBsum entry 3p16 Go to PDB code:  Pore analysis for: 3p16 calculated with MOLE 2.0 PDB id 3p16 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   27 pores, coloured by radius 27 pores, coloured by radius 27 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.74 1.89 39.4 -0.19 -0.20 9.9 71 3 3 1 7 0 4 0   2 2.04 3.38 39.4 -1.50 -0.22 22.3 76 1 6 0 3 1 2 0   3 1.23 1.22 40.4 0.07 -0.17 6.4 82 1 1 1 7 1 1 0   4 1.24 1.55 40.6 -1.43 -0.48 18.6 83 3 4 4 2 0 2 0   5 1.24 1.22 43.1 0.19 -0.21 6.6 83 1 2 1 8 1 1 0   6 3.11 3.20 43.1 -1.32 -0.45 16.7 84 3 5 2 3 2 0 0   7 2.93 3.65 43.2 -2.51 -0.66 31.8 81 4 6 2 1 1 2 0   8 3.13 4.20 44.3 -2.15 -0.54 28.1 81 6 1 0 2 1 2 0   9 1.22 1.23 53.9 -0.60 -0.20 13.2 81 2 3 2 4 1 2 0   10 2.01 2.19 54.9 -1.07 -0.28 14.4 78 2 6 2 5 1 4 0   11 3.44 4.86 62.4 -2.14 -0.35 26.2 78 5 5 2 3 1 4 0   12 1.28 1.35 65.1 -2.22 -0.54 26.4 78 6 7 2 3 2 1 0   13 2.70 3.93 66.5 -2.46 -0.57 30.4 80 9 7 1 3 1 1 0   14 2.01 2.18 75.3 -1.43 -0.37 20.7 80 7 7 2 5 1 3 0   15 3.06 3.94 81.1 -1.93 -0.47 26.3 83 10 6 4 4 0 2 0   16 3.09 3.93 98.2 -1.97 -0.40 25.9 78 8 7 3 6 1 4 0   17 1.19 1.39 99.9 -1.86 -0.37 26.8 81 7 7 2 9 2 4 0   18 1.28 3.25 114.6 -2.76 -0.48 36.3 82 13 8 2 5 0 3 0   19 1.28 3.53 120.5 -2.52 -0.49 33.1 80 14 9 2 3 1 4 0   20 2.34 2.61 124.3 -1.78 -0.44 23.9 78 9 9 3 6 4 5 0   21 1.30 1.48 124.6 -2.09 -0.46 26.0 84 10 8 4 6 1 3 0   22 2.71 4.13 129.6 -2.21 -0.42 29.7 77 11 10 3 7 4 6 0   23 2.70 4.08 130.2 -2.10 -0.48 27.6 79 12 11 3 6 3 4 0   24 2.03 2.16 139.9 -1.85 -0.42 25.0 79 11 13 3 8 2 6 0   25 2.80 4.11 153.9 -1.82 -0.38 26.2 82 16 7 5 9 3 2 0   26 1.26 1.38 172.7 -1.55 -0.38 22.0 82 10 11 5 12 2 6 0   27 1.19 1.81 179.0 -1.91 -0.45 26.6 85 14 8 7 14 2 3 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.