PDBsum entry 3oyc Go to PDB code:  Pore analysis for: 3oyc calculated with MOLE 2.0 PDB id 3oyc Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.89 1.89 38.1 -1.04 -0.76 12.0 79 1 1 0 0 0 0 0  DC 16 C DG 17 C DC 18 C DA 19 C DC 3 D DG 4 D DA 5 D DA 6 D DA 7 D DT 8 D DT 9 D 2 1.86 1.86 84.1 -0.82 -0.53 6.1 73 1 0 1 0 1 2 0  DT 5 C DC 6 C DT 15 C DC 16 C DG 17 C DC 18 C DA 5 D DA 6 D DA 7 D DT 8 D DT 9 D DC 10 D DC 11 D D A 12 D DT 13 D DG 14 D 3 1.21 1.21 86.4 -0.74 -0.56 5.5 73 1 0 1 0 1 2 0  DT 5 C DC 6 C DT 15 C DC 16 C DG 17 C DC 18 C DA 19 C DC 3 D DG 4 D DA 5 D DA 6 D DA 7 D DT 8 D DT 9 D DC 10 D DC 11 D DA 12 D DT 13 D DG 14 D Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.