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PDBsum entry 3ow8

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 3ow8 calculated with MOLE 2.0 PDB id
3ow8
Pores calculated on whole structure Pores calculated excluding ligands

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8 pores, coloured by radius 10 pores, coloured by radius 10 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.81 3.64 37.4 -1.30 -0.18 13.0 78 3 2 4 4 3 3 0  UNX 308 A
2 2.11 2.39 43.4 -1.55 -0.43 13.6 82 3 3 5 2 2 4 0  UNX 308 B
3 2.31 2.49 55.6 -1.41 -0.53 12.6 85 3 5 6 3 2 4 0  UNX 317 C
4 2.12 2.57 74.8 -1.64 -0.53 18.4 84 5 7 4 3 2 4 0  UNX 308 B
5 2.10 2.56 82.6 -1.38 -0.38 13.0 83 6 5 7 5 5 4 0  UNX 308 B UNX 316 C UNX 317 C
6 2.31 2.49 85.5 -1.51 -0.59 16.0 86 4 7 5 4 2 4 0  UNX 317 C
7 2.29 3.08 90.0 -2.54 -0.80 20.9 85 4 8 9 3 0 2 0  
8 2.13 2.57 105.5 -1.67 -0.53 18.4 80 5 9 6 4 3 5 0  UNX 308 B
9 2.31 2.50 116.1 -1.52 -0.58 15.9 82 4 9 7 5 3 5 0  UNX 317 C
10 1.59 4.31 154.3 -0.90 -0.20 12.9 82 5 7 7 11 4 5 0  UNX 311 D UNX 312 D UNX 313 D

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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