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PDBsum entry 3ou0

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protein ligands links
Hydrolase PDB id
3ou0

 

 

 

 

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Contents
Protein chain
392 a.a. *
Ligands
UNK-UNK-UNK-UNK-
UNK
UNK-UNK-UNK-UNK-
UNK-UNK-UNK
* Residue conservation analysis
PDB id:
3ou0
Name: Hydrolase
Title: Re-refined 3cs0
Structure: Periplasmic serine endoprotease degp. Chain: a. Fragment: degp, unp residues 27-474. Synonym: protease do, degp. Engineered: yes. Pentapeptide. Chain: b. Engineered: yes. Heptapeptide.
Source: Escherichia coli. Organism_taxid: 562. Gene: b0161, degp, htra, jw0157, ptd. Expressed in: escherichia coli. Expression_system_taxid: 562. Synthetic: yes. Synthetic: yes
Resolution:
3.00Å     R-factor:   0.197     R-free:   0.229
Authors: R.T.Sauer,R.A.Grant,S.Kim
Key ref: S.Kim et al. (2011). Covalent linkage of distinct substrate degrons controls assembly and disassembly of DegP proteolytic cages. Cell, 145, 67-78. PubMed id: 21458668
Date:
14-Sep-10     Release date:   19-Jan-11    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chain
Pfam   ArchSchema ?
P35963  (POL_HV1Y2) -  Gag-Pol polyprotein from Human immunodeficiency virus type 1 group M subtype B (isolate YU-2)
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
1435 a.a.
392 a.a.*
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 295 residue positions (black crosses)

 Enzyme reactions 
   Enzyme class: E.C.3.4.21.107  - peptidase Do.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]

 

 
Cell 145:67-78 (2011)
PubMed id: 21458668  
 
 
Covalent linkage of distinct substrate degrons controls assembly and disassembly of DegP proteolytic cages.
S.Kim, R.A.Grant, R.T.Sauer.
 
  ABSTRACT  
 
No abstract given.

 

Literature references that cite this PDB file's key reference

  PubMed id Reference
22245966 H.Malet, F.Canellas, J.Sawa, J.Yan, K.Thalassinos, M.Ehrmann, T.Clausen, and H.R.Saibil (2012).
Newly folded substrates inside the molecular cage of the HtrA chaperone DegQ.
  Nat Struct Mol Biol, 19, 152-157.
PDB codes: 4a8a 4a8b 4a8c 4a8d 4a9g
The most recent references are shown first. Citation data come partly from CiteXplore and partly from an automated harvesting procedure. Note that this is likely to be only a partial list as not all journals are covered by either method. However, we are continually building up the citation data so more and more references will be included with time. Where a reference describes a PDB structure, the PDB codes are shown on the right.

 

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