PDBsum entry 3otc Go to PDB code:  Tunnel analysis for: 3otc calculated with MOLE 2.0 PDB id 3otc Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.58 1.73 25.6 -0.88 -0.41 6.0 87 2 1 6 1 1 0 1   2 1.21 1.70 29.2 0.84 0.34 6.6 78 1 2 3 6 4 0 0   3 1.21 1.58 29.1 0.87 0.37 6.7 78 1 1 3 7 4 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.