PDBsum entry 3osg

Transcription/DNA

PDB id: 3osg

Contents

Protein chains

110 a.a.

103 a.a.

DNA/RNA

Waters ×300

PDB id:

3osg

Name:

Transcription/DNA

Title:

The structure of protozoan parasite trichomonas vaginalis myb2 in complex with mre-1-12 DNA

Structure:

Myb21. Chain: a, d. Fragment: myb2 r2r3 domain. Synonym: myb-like DNA-binding domain containing protein. Engineered: yes. 5'-d( Ap Ap Ap Tp Ap Tp Cp Gp Tp Tp Ap T)-3'. Chain: b, e. Synonym: mre-2f. Engineered: yes.

Source:

Trichomonas vaginalis. Organism_taxid: 5722. Gene: tvag_211210. Expressed in: escherichia coli. Expression_system_taxid: 562. Synthetic: yes. Synthetic: yes

Resolution:

2.00Å R-factor: 0.193 R-free: 0.233

Authors:

I.Jiang,C.K.Tsai,S.C.Chen,S.H.Wang,I.Amiraslanov,C.F.Chang,W.J.Wu, J.H.Tai,Y.C.Liaw,T.H.Huang

Key ref:

I.Jiang et al. (2011). Molecular basis of the recognition of the ap65-1 gene transcription promoter elements by a Myb protein from the protozoan parasite Trichomonas vaginalis. Nucleic Acids Res, 39, 8992-9008. PubMed id: 21771861

Date:

09-Sep-10 Release date: 03-Aug-11

Protein chain

Q58HP3  (Q58HP3_TRIVA) -  MYB21 from Trichomonas vaginalis

Seq: 179 a.a.

Struc: 110 a.a.

Protein chain

Q58HP3  (Q58HP3_TRIVA) -  MYB21 from Trichomonas vaginalis

Seq: 179 a.a.

Struc: 103 a.a.

DNA/RNA chains

A-A-A-T-A-T-C-G-T-T-A-T 12 bases

A-T-A-A-C-G-A-T-A-T-T-T 12 bases

A-A-A-T-A-T-C-G-T-T-A-T 12 bases

A-T-A-A-C-G-A-T-A-T-T-T 12 bases

Enzyme reactions

• Enzyme class: Chains A, D: E.C.?

Nucleic Acids Res 39:8992-9008 (2011)

PubMed id: 21771861

Molecular basis of the recognition of the ap65-1 gene transcription promoter elements by a Myb protein from the protozoan parasite Trichomonas vaginalis.

I.Jiang, C.K.Tsai, S.C.Chen, S.H.Wang, I.Amiraslanov, C.F.Chang, W.J.Wu, J.H.Tai, Y.C.Liaw, T.H.Huang.

ABSTRACT

No abstract given.