PDBsum entry 3olt Go to PDB code:  Tunnel analysis for: 3olt calculated with MOLE 2.0 PDB id 3olt Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.60 1.60 35.2 0.50 0.02 6.8 80 3 1 2 7 5 0 0  EDO 701 B ACD 708 B 2 1.58 1.58 38.8 1.55 0.68 3.2 75 1 0 2 11 8 0 0  ACD 708 B 3 1.36 1.63 47.7 0.38 0.05 5.8 77 3 0 6 8 4 1 0  EDO 706 B ACD 708 B NAG 1 F 4 1.41 1.65 47.8 0.20 -0.04 6.8 76 3 1 3 6 4 1 0  ACD 708 B NAG 1 D 5 1.31 1.45 51.1 -0.68 -0.11 12.9 77 4 4 4 6 5 1 2  ACD 708 B Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.