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PDBsum entry 3olr

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 3olr calculated with MOLE 2.0 PDB id
3olr
Pores calculated on whole structure Pores calculated excluding ligands

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12 pores, coloured by radius 14 pores, coloured by radius 14 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.16 1.16 27.6 -0.87 -0.23 9.1 72 2 2 1 2 1 2 0  
2 1.40 1.46 35.0 -2.22 -0.37 19.1 85 4 4 4 0 2 1 0  
3 1.47 1.46 39.6 -2.18 -0.38 19.5 83 5 2 4 0 2 1 0  
4 1.44 2.61 39.9 -2.65 -0.55 24.8 84 6 4 6 0 1 1 0  
5 1.15 1.29 40.3 -1.81 -0.31 21.0 80 4 4 3 3 3 0 0  PTR 394 H
6 2.89 3.62 40.6 -2.43 -0.66 32.1 82 4 4 2 2 0 1 0  
7 1.49 1.52 43.4 -1.66 -0.31 19.3 83 4 3 5 2 3 1 0  
8 1.46 1.60 46.4 -1.84 -0.42 14.9 84 4 3 7 3 3 1 0  
9 1.40 1.47 46.7 -2.07 -0.50 18.8 85 5 3 6 1 2 1 0  
10 2.74 3.38 57.9 -1.63 -0.45 24.7 82 4 4 2 2 1 0 0  
11 1.16 1.30 60.2 -2.18 -0.42 27.2 81 5 6 4 3 3 1 0  PTR 394 H
12 1.67 2.81 104.0 -1.90 -0.51 19.6 85 5 7 8 4 2 3 0  
13 1.50 1.55 125.8 -1.68 -0.49 19.2 84 8 8 9 6 2 3 0  PTR 394 G
14 1.45 1.42 190.8 -1.85 -0.35 21.9 77 10 13 9 5 8 2 1  PTR 394 G

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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