PDBsum entry 3okw Go to PDB code:  Tunnel analysis for: 3okw calculated with MOLE 2.0 PDB id 3okw Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   9 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.28 1.28 22.0 -0.72 -0.31 11.6 86 3 0 2 5 1 0 0  GOL 2003 A 2 1.28 1.28 23.8 -1.25 -0.70 9.6 85 2 1 2 5 0 0 0   3 1.27 1.27 25.0 -0.56 -0.33 9.5 82 2 1 2 7 0 0 0  GOL 2003 A 4 1.38 1.97 24.2 -0.18 0.10 12.1 79 2 1 2 5 2 2 0   5 1.11 2.14 18.0 -0.01 0.17 9.9 81 1 0 1 4 1 1 0   6 1.17 1.39 22.8 0.05 0.08 18.7 86 4 2 1 6 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.