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PDBsum entry 3oks

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 3oks calculated with MOLE 2.0 PDB id
3oks
Pores calculated on whole structure Pores calculated excluding ligands

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2 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 4.47 4.47 33.2 -1.01 -0.21 24.3 88 5 2 1 6 0 0 0  
2 1.66 1.88 38.3 -1.37 -0.44 16.9 87 4 1 2 3 1 1 0  EDO 485 D
3 1.65 1.88 42.3 -1.49 -0.49 17.7 87 4 2 3 2 1 1 0  EDO 485 D
4 1.55 1.65 51.7 -1.12 -0.36 16.4 88 5 2 3 4 1 1 0  EDO 480 D EDO 485 D

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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