PDBsum entry 3oj3 Go to PDB code:  Pore analysis for: 3oj3 calculated with MOLE 2.0 PDB id 3oj3 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   19 pores, coloured by radius 19 pores, coloured by radius 19 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.93 3.94 27.8 -2.71 -0.58 29.5 76 5 3 3 0 2 1 0   2 2.17 2.58 30.4 -1.92 -0.56 19.9 82 5 3 5 0 2 1 0   3 1.97 2.19 38.8 -0.86 -0.30 13.1 77 4 3 2 2 2 2 0   4 2.15 2.76 44.4 -1.61 -0.60 9.4 89 0 3 8 2 1 3 0   5 2.21 2.95 46.0 -1.63 -0.56 13.7 87 3 2 5 3 2 2 0   6 2.15 2.77 48.5 -2.54 -0.79 21.5 84 1 5 7 0 0 3 0   7 2.08 2.06 56.3 -1.77 -0.42 22.6 81 5 6 5 3 4 1 0   8 2.10 2.09 67.6 -1.92 -0.43 22.6 82 7 7 8 3 5 1 0   9 2.59 2.62 76.6 -1.97 -0.61 21.4 83 5 3 4 0 2 0 0   10 2.11 2.54 78.2 -2.09 -0.37 26.8 81 9 4 4 3 4 0 0   11 2.08 2.52 78.6 -1.60 -0.41 20.7 81 5 3 4 3 2 2 0   12 2.25 2.89 79.5 -2.15 -0.54 23.2 80 7 6 5 1 2 2 0   13 2.08 2.09 80.3 -1.84 -0.50 20.2 83 7 8 10 4 6 2 0   14 2.99 4.91 80.1 -2.31 -0.57 21.6 81 6 6 8 2 3 3 0   15 2.14 2.50 80.5 -1.90 -0.61 14.3 87 5 5 11 1 2 3 0   16 2.08 2.06 85.8 -1.85 -0.53 19.8 81 6 7 8 3 4 3 0   17 2.11 2.45 98.5 -1.78 -0.41 21.7 83 9 5 8 3 4 1 0   18 0.99 1.89 100.3 -1.54 -0.41 20.6 81 5 4 5 4 2 0 0   19 2.12 2.30 122.1 -2.11 -0.56 21.6 84 11 9 10 2 5 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.