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PDBsum entry 3oha
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Pore analysis for: 3oha calculated with  MOLE 2.0
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PDB id
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3oha
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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12 pores,
coloured by radius |
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10 pores,
coloured by radius
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10 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.85 |
2.21 |
29.9 |
-0.88 |
-0.08 |
19.5 |
84 |
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6 |
2 |
2 |
3 |
1 |
0 |
0 |
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DCP 514 A MG 519 A DT 10 P DOC 11 P DG 6 T DA 7 T
DG 8 T
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2 |
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2.38 |
2.40 |
49.0 |
-1.49 |
-0.43 |
15.8 |
91 |
4 |
0 |
2 |
1 |
0 |
0 |
0 |
SO4 516 A DT 2 P DC 3 P DC 4 P DC 7 P DC 8 P DC 9
P DT 10 P DOC 11 P DT 4 T DG 6 T DA 7 T DG 8 T DG
9 T DG 10 T DG 11 T DA 12 T
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3 |
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1.46 |
1.87 |
50.1 |
-1.44 |
-0.45 |
14.4 |
79 |
4 |
0 |
2 |
2 |
1 |
1 |
0 |
DT 2 P DC 3 P DC 4 P DG 9 T DG 10 T DG 11 T DA 12
T
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4 |
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1.85 |
1.85 |
50.8 |
-1.34 |
-0.50 |
11.8 |
92 |
3 |
0 |
2 |
1 |
0 |
1 |
0 |
SO4 516 A DT 2 P DC 3 P DC 4 P DC 7 P DC 8 P DC 9
P DT 10 P DOC 11 P DT 4 T DG 6 T DA 7 T DG 8 T DG
9 T DG 10 T DG 11 T
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5 |
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2.38 |
2.39 |
52.8 |
-1.70 |
-0.38 |
15.5 |
89 |
4 |
0 |
3 |
1 |
1 |
0 |
0 |
SO4 516 A DT 2 P DC 3 P DC 4 P DC 7 P DC 8 P DC 9
P DT 4 T 8OG 5 T DG 6 T DA 7 T DG 8 T DG 9 T DG
10 T DG 11 T DA 12 T
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6 |
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1.85 |
1.85 |
54.6 |
-1.65 |
-0.41 |
13.2 |
89 |
3 |
0 |
3 |
1 |
1 |
1 |
0 |
SO4 516 A DT 2 P DC 3 P DC 4 P DC 7 P DC 8 P DC 9
P DT 4 T 8OG 5 T DG 6 T DA 7 T DG 8 T DG 9 T DG
10 T DG 11 T
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7 |
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1.72 |
1.90 |
56.5 |
-1.15 |
-0.05 |
13.9 |
75 |
3 |
5 |
2 |
1 |
3 |
0 |
0 |
DCP 514 A MG 519 A DT 10 P DOC 11 P DG 6 T DA 7 T
DG 8 T DG 9 T DG 10 T DG 11 T
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8 |
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1.72 |
1.81 |
63.3 |
-1.15 |
-0.03 |
15.4 |
73 |
7 |
3 |
1 |
3 |
4 |
0 |
0 |
DG 8 T DG 9 T DG 10 T DG 11 T
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9 |
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1.15 |
1.60 |
65.2 |
-0.08 |
-0.03 |
11.4 |
77 |
8 |
1 |
1 |
8 |
3 |
0 |
0 |
DC 9 P DG 8 T DG 9 T DG 10 T DG 11 T
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10 |
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1.65 |
1.84 |
69.4 |
-1.17 |
-0.32 |
11.9 |
73 |
2 |
3 |
3 |
1 |
3 |
3 |
0 |
DT 2 P DC 3 P DC 4 P DG 10 T DG 11 T
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program