PDBsum entry 3ogu Go to PDB code:  Tunnel analysis for: 3ogu calculated with MOLE 2.0 PDB id 3ogu Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.44 1.50 17.0 -1.45 -0.51 16.5 95 2 0 1 0 0 0 0  DT 5 P DG 6 P DC 4 T DT 5 T 2 1.57 1.57 17.2 -1.66 -0.66 11.9 96 2 0 2 0 0 0 0  DG 3 P DA 4 P DT 5 P DG 6 P DC 4 T DT 5 T DG 6 T 3 1.53 1.53 33.8 -1.13 -0.33 16.0 81 4 1 2 2 1 1 0  DT 5 P DG 6 P DC 1 T DA 2 T DT 3 T Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.