PDBsum entry 3ofi Go to PDB code:  Pore analysis for: 3ofi calculated with MOLE 2.0 PDB id 3ofi Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.22 1.22 30.8 0.12 0.00 11.8 72 2 3 2 4 2 0 0   2 1.87 4.53 44.1 -1.83 -0.47 23.7 82 7 9 4 3 2 1 0   3 1.37 1.51 74.8 -0.89 -0.06 14.7 82 7 4 7 11 6 0 0  DIO 2014 B 4 1.29 1.53 76.4 -1.17 -0.18 16.6 82 7 9 7 6 6 0 0   5 1.21 2.07 79.9 -1.42 -0.23 16.1 83 9 5 9 8 5 0 0  DIO 2014 B 6 1.34 1.48 79.8 -1.42 -0.30 21.3 86 8 7 7 12 2 0 0  DIO 2014 B 7 1.21 1.22 81.9 -1.08 -0.24 16.5 78 6 6 8 7 7 0 0   8 1.22 2.04 80.0 -2.70 -0.50 26.7 81 8 3 5 3 1 2 0   9 1.37 1.51 83.8 -1.75 -0.22 22.1 79 11 6 6 6 6 1 0   10 1.22 1.23 82.8 -1.28 -0.16 19.1 80 8 4 9 13 6 0 0  DIO 2014 B 11 1.22 2.05 84.9 -1.95 -0.46 21.9 87 9 8 9 9 1 0 0  DIO 2014 B 12 1.31 1.86 86.9 -0.37 -0.01 11.4 76 6 5 5 8 8 1 0   13 1.21 2.18 87.9 -1.84 -0.33 20.7 81 10 5 11 10 5 0 0  DIO 2014 B 14 1.24 2.14 88.2 -0.94 -0.26 13.7 85 7 2 7 7 2 1 0  DIO 2014 B 15 1.34 1.48 88.8 -2.25 -0.43 27.9 82 12 9 6 7 2 1 0   16 1.44 2.40 91.7 -1.60 -0.27 22.9 81 9 3 3 8 2 2 0  DIO 2014 B 17 1.27 1.27 94.5 -1.05 -0.28 18.7 79 8 6 8 14 2 3 0   18 1.35 1.91 95.5 -0.70 -0.03 14.6 79 9 4 6 15 7 1 0  DIO 2014 B 19 1.23 1.24 96.1 -1.56 -0.30 21.5 80 8 10 10 10 6 0 0   20 1.22 2.14 96.5 -2.90 -0.56 28.6 80 11 3 5 1 2 2 0   21 1.33 1.90 101.1 -0.96 -0.09 17.3 78 9 9 7 11 7 1 0   22 1.30 1.35 113.2 -2.17 -0.42 24.8 80 10 17 10 5 6 1 0   23 1.66 1.77 111.3 -1.27 -0.17 19.3 79 12 5 9 18 5 3 0  DIO 2014 B 24 1.26 1.33 111.5 -1.96 -0.34 23.5 79 9 12 9 10 6 1 0  DIO 2014 B 25 1.30 1.53 113.0 -1.48 -0.27 20.9 80 13 10 10 13 5 3 0   26 1.38 1.54 114.3 -1.06 -0.20 17.0 77 10 7 7 12 6 3 0   27 1.26 2.05 116.6 -2.38 -0.46 24.2 79 11 13 11 6 5 1 0  DIO 2014 B 28 1.22 2.14 116.4 -1.60 -0.28 19.8 80 14 6 11 15 4 3 0  DIO 2014 B 29 1.38 1.50 125.2 -2.19 -0.62 24.6 79 8 16 6 1 3 2 0   30 1.31 1.47 137.3 -1.75 -0.30 23.7 81 13 12 8 9 5 3 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.